Differences

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--- download:whatsnew [20:51 01.03.2016] – [Simulator] Walter
+++ download:whatsnew [15:35 22.10.2018] (current) – [Open source] Jörn Starruß
@@ Line 6: / Line 6: @@
 ==== Open source ====
-  * Morpheus 2 is now **open source**.
+  * Morpheus is now **open source**.
-    * Source code is available in the [[https://gitlab.com/users/sign_in|Git repository]].
+    * Source code is available in the [[https://gitlab.com/morpheus.lab/morpheus|Git repository]].
     * Released under a permissive [[https://opensource.org/licenses/BSD-3-Clause|BSD license]]
-  * Morpheus 2 is an **extensible framework**
+  * Morpheus is an **extensible framework**
-    * Modeling and analysis tools can be customized or added as plugins
+    * New modeling and analysis components can be added as plugins
-    * A stable C++ API has been developed for plugin development
+      * Extend the Morpheus modeling language MorpheusML by your concept
-      * Simple integration of XML and implementation
+      * Place your concept implementation into a plugin based on the stable C++ extension API and profit from
-      * Automated symbol dependency tracking and scheduling
+        * Simple integration of MorpheusML and implementation
+        * Automated symbol dependency tracking and scheduling
+        * Integration with other components via math expression
+      * Integrate external simulation code into Morpheus by using the Symbol interface
 ==== Simulator ====
@@ Line 19: / Line 22: @@
   * **Expressions everywhere**
-    * In addition to numerical values, plugin can now take mathematical expressions as inputs
+    * In addition to numerical values, plugin parameters can now take mathematical expressions as inputs
     * Greatly improves modeling flexibility by coupling of submodels
+    * CPM temperature can now also be function of time, e.g. to simulate annealing.
 [{{ :download:math_expression_2.png?direct&150 |Parameters can given as math expressions, interpreted at run-time.}}]
+  * **CPM surface scaling**
+    * New correction terms for scaling of surface of CPM cells
+    * Now calculated in accordance to the scaling rules as specified in [[http://bmcbiophys.biomedcentral.com/articles/10.1186/s13628-015-0022-x|Magno et al., BMC Biophysics, 2015]]
@@ Line 53: / Line 61: @@
   * **Performance optimization**
     * Automatic scheduling has been revised and optimized by subdividing according to spatial contexts.
+    * Tracking of CPM object properties has been moved to an adaptive tracker, tracking only the required information
     * All expressions are now in thread-safe containers to optimize use of multithreading.
@@ Line 74: / Line 83: @@
     * Plotting: Logger also provides a versatile interface for generating data visualizations including time plots, phase diagrams, cell trajectory plot, spacetime plot, profile plots, surface plots etc.
-[{{ :download:logger2.png?direct&500 |The new ''Logger'' plugin provides a versatile interface for data export and data visualization.}}]
+[{{ :download:logger.png?direct&500 |The new ''Logger'' plugin provides a versatile interface for data export and data visualization.}}]
 ==== MorpheusML ====